Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918207.1_cds_XP_016467698.1_60416
CDS Infomation

[gene=LOC107790295] [db_xref=GeneID:107790295] [protein=rho GTPase-activating protein 5-like] [protein_id=XP_016467698.1] [location=join(28420..28829,33030..33150,33303..33422,34469..34699,35210..35785)] [gbkey=CDS]
Sequence

ATGACAGAGGTACTCCACTCCTCTTCTCCTTCCTCTTCTTCTCCTTCAATATCTACACCT
ACCCGCAATGGCCACACATTGTTTGTAGAAGAAGAAATTGAGAGGGGTTCTGAGGTTGCT
GTTTGTGATTCTGAGGAAGAAATAGAGGAGAAAAAGAGAGATAAAGAAAGAAGAGATCAT
TTGTCTTTATTGGCCCTTTTAGTGACATTGTTTAGGAAGAGTTTTTGGATGGCTTGTAAG
ACAGATAGGGAAGGAGGAGGAGATCTGTGTGGTGGTAGTAGGGGTATGGAAATTGGGTGG
CCTACTAATGTGCGCCATGTTGCGCACGTTACTTTTGATAGGTTCAATGGATTCTTGGGT
CTCCCTGTTGAATTTGAGCCTGAAGTTTCCAGAAGAGCCCCCAGTGCTAGTACCACTGTA
TTTGGAGTGTCAACGGAGTCCATGCAGTTATCATTCGATTCCCGTGGGAATAGTGTTCCA
ACTATTCTCCTTCTAATGCAAAGGCGTTTGTATGCTCAAGGGGGTCTACAGGCAGAAGGG
ATTTTTAGGATAAATGCTGAAAACAGCGAGGAGGAGCTTGTTAGGGAGCAATTAAACAGG
GGAATAGTTCCGGATGGGATTGATGTACATTGTTTGGCAGGCCTCATTAAGGCGTGGTTC
AGGGAGCTGCCAAGTGGGGTGTTGGATACACTTTCTCCCGAGCAGGTCATGCAGTGCCAA
TCAGAAGATGACAGCATTGCACTCGTGAGACTTCTGCCGCCAACAGAAGCTGCTCTGCTG
GACTGGGCTATCAATCTCATGGCTGATGTTGTCCAGGAAGAACACCTTAACAAGATGAAT
ACGCGCAACATCGCAATGGTGTTTGCTCCTAACATGACACAGATGGCAGATCCGTTGACT
GCACTGATGTATGCTGTTCAAGTAATGAATTTCTTGAGGACACTCATCGAAAGGACCTTA
AAAGAAAGAGAAGATTCCCTTATCGAACCGGCTTCTGTTTCTAACCTAGGCCGACCTGAT
GAGAATGGTCGCCAAAGTCCACCGCAACTATCTCTGGGAAACTCCAATGAATCAAATGAA
CTGACTGAACAGGTCTATACTGTAGAAGAGCCCGATTCAGCCAGGGTGTCTGAATCTAAT
CGAGTAGATAACATCACTGATGATGAATATCTTAGTTATACAACTTCTTCAGAGGAATCT
GACGATAGTGTATCTTGTGAAACTCCTATCCATGTTAGTACTATGGCAAGAGAAGCCTGT
GTGACAAAAGGTCCAAACTTTGAAGAGGACGCTCAAAGGATAGGCCAGTCAAGTGATTCT
AGTCCGATGAAGGATGTTCTGAAAATTGATTTAGAGCCAACTGCAGTTCAGTCTCTGGGA
AATGATAGTAAATCGAAAGGAATAAGCAACTTGAGCCGCATAAACTCAATGACAGAGCGG
ACAGAAGCCTGGCGGTAA

Peptide Sequence

PEP ID

XP_016467698.1
PEP Infomation

PREDICTED: rho GTPase-activating protein 5-like [Nicotiana tabacum]
Sequence

MTEVLHSSSPSSSSPSISTPTRNGHTLFVEEEIERGSEVAVCDSEEEIEEKKRDKERRDH
LSLLALLVTLFRKSFWMACKTDREGGGDLCGGSRGMEIGWPTNVRHVAHVTFDRFNGFLG
LPVEFEPEVSRRAPSASTTVFGVSTESMQLSFDSRGNSVPTILLLMQRRLYAQGGLQAEG
IFRINAENSEEELVREQLNRGIVPDGIDVHCLAGLIKAWFRELPSGVLDTLSPEQVMQCQ
SEDDSIALVRLLPPTEAALLDWAINLMADVVQEEHLNKMNTRNIAMVFAPNMTQMADPLT
ALMYAVQVMNFLRTLIERTLKEREDSLIEPASVSNLGRPDENGRQSPPQLSLGNSNESNE
LTEQVYTVEEPDSARVSESNRVDNITDDEYLSYTTSSEESDDSVSCETPIHVSTMAREAC
VTKGPNFEEDAQRIGQSSDSSPMKDVLKIDLEPTAVQSLGNDSKSKGISNLSRINSMTER
TEAWR

Transcript Sequence

Gene sequence data has not been registered.